Research workbench
AlphaFold monomer V2.0 prediction for ubiquilin (Q9NIF3)
Analyse AlphaFold monomer V2.0 prediction for ubiquilin (Q9NIF3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9NIF3
- Type
- protein
- Length
- 523 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x025f3b1a898b05AD2731bE6Ab72687b5920c4A3F
- Molecule
- Ubiquilin
- UniProt
- Q9NIF3
- Pockets
- 6 · best druggability 0.53
Structure
1 distinct chain · 44% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ubiquilin | protein | 523 | 44% helix, 5% strand | Q9NIF3 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 226 | 0.53 | 0.76 | 27 | empty |
| 2 | 99 | 0.44 | 0.78 | 22 | empty |
| 3 | 131 | 0.42 | 0.74 | 15 | empty |
| 4 | 118 | 0.41 | 0.75 | 23 | empty |
| 5 | 111 | 0.39 | 0.75 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9NIF3
- Elsewhere: UniProt Q9NIF3 · AlphaFold DB Q9NIF3
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