Research workbench
AlphaFold monomer V2.0 prediction for probable protein kinase ubib (Q8PDW1)
Analyse AlphaFold monomer V2.0 prediction for probable protein kinase ubib (Q8PDW1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8PDW1
- Type
- protein
- Length
- 557 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7012c0b45c68a2c067644b9d3e5DDa06892c6957
- Molecule
- Probable protein kinase ubib
- UniProt
- Q8PDW1
- Pockets
- 5 · best druggability 0.80
Structure
1 distinct chain · 63% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable protein kinase ubib | protein | 557 | 63% helix, 9% strand | Q8PDW1 |
Pockets
5 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 148 | 0.80 | 0.96 | 27 | empty |
| 2 | 878 | 0.77 | 0.80 | 78 | empty |
| 3 | 615 | 0.77 | 0.82 | 43 | empty |
| 4 | 53 | 0.72 | 0.98 | 23 | empty |
| 5 | 83 | 0.30 | 0.73 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8PDW1
- Elsewhere: UniProt Q8PDW1 · AlphaFold DB Q8PDW1
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