Research workbench
AlphaFold monomer V2.0 prediction for probable protein kinase ubib (Q3YVD0)
Analyse AlphaFold monomer V2.0 prediction for probable protein kinase ubib (Q3YVD0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q3YVD0
- Type
- protein
- Length
- 546 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0a7904E17cd267e2b1BB3805b86763D97C12ff87
- Molecule
- Probable protein kinase ubib
- UniProt
- Q3YVD0
- Pockets
- 4 · best druggability 0.87
Structure
1 distinct chain · 63% helix, 8% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable protein kinase ubib | protein | 546 | 63% helix, 8% strand | Q3YVD0 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1146 | 0.87 | 0.88 | 106 | empty |
| 2 | 684 | 0.79 | 0.83 | 45 | empty |
| 3 | 69 | 0.31 | 0.74 | 11 | empty |
| 4 | 55 | 0.26 | 0.73 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3YVD0
- Elsewhere: UniProt Q3YVD0 · AlphaFold DB Q3YVD0
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