Research workbench
AlphaFold monomer V2.0 prediction for ubiquitin-conjugating enzyme E2 S (B5DKM4)
Analyse AlphaFold monomer V2.0 prediction for ubiquitin-conjugating enzyme E2 S (B5DKM4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B5DKM4
- Type
- protein
- Length
- 209 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB35df660264f41795De49C83276C108A4ba91ADE
- Molecule
- Ubiquitin-conjugating enzyme E2 S
- UniProt
- B5DKM4
- Pockets
- 3 · best druggability 0.51
Structure
1 distinct chain · 40% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ubiquitin-conjugating enzyme E2 S | protein | 209 | 40% helix, 11% strand | B5DKM4 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 172 | 0.51 | 0.78 | 17 | empty |
| 2 | 123 | 0.42 | 0.75 | 20 | empty |
| 3 | 91 | 0.39 | 0.76 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5DKM4
- Elsewhere: UniProt B5DKM4 · AlphaFold DB B5DKM4
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