Research workbench
AlphaFold monomer V2.0 prediction for ubiquitin-associated domain- containing protein 2 (Q8NBM4)
Analyse AlphaFold monomer V2.0 prediction for ubiquitin-associated domain- containing… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8NBM4
- Type
- protein
- Length
- 344 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x40B9C9d5F084D34d026E9d5Dd10501AcdF6d6152
- Molecule
- Ubiquitin-associated domain-containing protein 2
- UniProt
- Q8NBM4
- Pockets
- 5 · best druggability 0.66
Structure
1 distinct chain · 65% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ubiquitin-associated domain-containing protein 2 | protein | 344 | 65% helix, 1% strand | Q8NBM4 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 562 | 0.66 | 0.77 | 53 | empty |
| 2 | 308 | 0.62 | 0.79 | 34 | empty |
| 3 | 68 | 0.44 | 0.81 | 14 | empty |
| 4 | 67 | 0.41 | 0.81 | 15 | empty |
| 5 | 61 | 0.30 | 0.74 | 11 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8NBM4
- Elsewhere: UniProt Q8NBM4 · AlphaFold DB Q8NBM4
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