Research workbench
AlphaFold monomer V2.0 prediction for UPF0652 protein (Q54BM8)
Analyse AlphaFold monomer V2.0 prediction for UPF0652 protein (Q54BM8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q54BM8
- Type
- protein
- Length
- 677 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7782F4817b37743d738e9aF842bf74bd50f2015E
- Molecule
- UPF0652 protein
- UniProt
- Q54BM8
- Pockets
- 10 · best druggability 0.73
Structure
1 distinct chain · 48% helix, 4% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | UPF0652 protein | protein | 677 | 48% helix, 4% strand | Q54BM8 |
Pockets
10 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 954 | 0.73 | 0.77 | 71 | empty |
| 2 | 369 | 0.60 | 0.76 | 44 | empty |
| 3 | 207 | 0.55 | 0.79 | 22 | empty |
| 4 | 180 | 0.47 | 0.75 | 30 | empty |
| 5 | 133 | 0.43 | 0.76 | 27 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q54BM8
- Elsewhere: UniProt Q54BM8 · AlphaFold DB Q54BM8
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