Research workbench
AlphaFold monomer V2.0 prediction for tetratricopeptide repeat protein 39B (Q28DB0)
Analyse AlphaFold monomer V2.0 prediction for tetratricopeptide repeat protein 39B… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q28DB0
- Type
- protein
- Length
- 588 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd91633319BDB0a92cbC4f08DeA734Bf74C030064
- Molecule
- Tetratricopeptide repeat protein 39B
- UniProt
- Q28DB0
- Pockets
- 8 · best druggability 0.82
Structure
1 distinct chain · 70% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Tetratricopeptide repeat protein 39B | protein | 588 | 70% helix, 1% strand | Q28DB0 |
Pockets
8 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1099 | 0.82 | 0.83 | 83 | empty |
| 2 | 153 | 0.56 | 0.82 | 26 | empty |
| 3 | 208 | 0.45 | 0.73 | 30 | empty |
| 4 | 134 | 0.41 | 0.75 | 22 | empty |
| 5 | 75 | 0.40 | 0.79 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q28DB0
- Elsewhere: UniProt Q28DB0 · AlphaFold DB Q28DB0
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