Research workbench
AlphaFold monomer V2.0 prediction for type VI secretion system baseplate component TSSK1 (Q9I753)
Analyse AlphaFold monomer V2.0 prediction for type VI secretion system baseplate… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9I753
- Type
- protein
- Length
- 444 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x074B355E6B4396890e7f52FF4c3a7ab517E7705a
- Molecule
- Type VI secretion system baseplate component TSSK1
- UniProt
- Q9I753
- Pockets
- 6 · best druggability 0.50
Structure
1 distinct chain · 33% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Type VI secretion system baseplate component TSSK1 | protein | 444 | 33% helix, 26% strand | Q9I753 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 198 | 0.50 | 0.77 | 33 | empty |
| 2 | 137 | 0.44 | 0.76 | 19 | empty |
| 3 | 147 | 0.44 | 0.76 | 29 | empty |
| 4 | 136 | 0.40 | 0.74 | 21 | empty |
| 5 | 109 | 0.40 | 0.76 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9I753
- Elsewhere: UniProt Q9I753 · AlphaFold DB Q9I753
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