Research workbench
AlphaFold monomer V2.0 prediction for pre-rRNA-processing protein TSR1 homolog (Q5SWD9)
Analyse AlphaFold monomer V2.0 prediction for pre-rRNA-processing protein TSR1 homolog… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5SWD9
- Type
- protein
- Length
- 803 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa178cE677748B9f80A2a9921a7edc5C39EDB037A
- Molecule
- Pre-rRNA-processing protein TSR1 homolog
- UniProt
- Q5SWD9
- Pockets
- 10 · best druggability 0.65
Structure
1 distinct chain · 21% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pre-rRNA-processing protein TSR1 homolog | protein | 803 | 21% helix, 26% strand | Q5SWD9 |
Pockets
10 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 298 | 0.65 | 0.81 | 37 | empty |
| 2 | 451 | 0.59 | 0.75 | 39 | empty |
| 3 | 172 | 0.56 | 0.80 | 22 | empty |
| 4 | 70 | 0.50 | 0.85 | 19 | empty |
| 5 | 145 | 0.42 | 0.75 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5SWD9
- Elsewhere: UniProt Q5SWD9 · AlphaFold DB Q5SWD9
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