Research workbench
AlphaFold monomer V2.0 prediction for thrombospondin-3B (Q1L8P7)
Analyse AlphaFold monomer V2.0 prediction for thrombospondin-3B (Q1L8P7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q1L8P7
- Type
- protein
- Length
- 929 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5e58272ea25a05e06901A2eAe9f63939b344e0c6
- Molecule
- Thrombospondin-3B
- UniProt
- Q1L8P7
- Pockets
- 6 · best druggability 0.71
Structure
1 distinct chain · 14% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Thrombospondin-3B | protein | 929 | 14% helix, 27% strand | Q1L8P7 |
Pockets
6 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 833 | 0.71 | 0.77 | 63 | empty |
| 2 | 619 | 0.62 | 0.73 | 59 | empty |
| 3 | 375 | 0.56 | 0.74 | 36 | empty |
| 4 | 151 | 0.53 | 0.81 | 26 | empty |
| 5 | 151 | 0.53 | 0.80 | 31 | empty |
Modifications
Observed in the structure: 19 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q1L8P7
- Elsewhere: UniProt Q1L8P7 · AlphaFold DB Q1L8P7
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