Research workbench
AlphaFold monomer V2.0 prediction for hth-type transcriptional regulator tsar (P94678)
Analyse AlphaFold monomer V2.0 prediction for hth-type transcriptional regulator tsar… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P94678
- Type
- protein
- Length
- 298 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf1a8F1556714059A77767ecA75A15ac431c60971
- Molecule
- Hth-type transcriptional regulator tsar
- UniProt
- P94678
- Pockets
- 2 · best druggability 0.65
Structure
1 distinct chain · 43% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hth-type transcriptional regulator tsar | protein | 298 | 43% helix, 23% strand | P94678 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 245 | 0.65 | 0.83 | 47 | empty |
| 2 | 85 | 0.31 | 0.73 | 14 | empty |
Compared structures
- 3FXU · Crystal structure of tsar in complex with its effector P- toluenesulfonate · an experimental structure of the same protein · chain A against B, TM-score 0.89
- 3FXU · Crystal structure of TsaR in complex with its effector p-toluenesulfonate · an experimental structure of the same protein · chain A against B, TM-score 0.89
- 3FZJ · TsaR low resolution crystal structure, tetragonal form · an experimental structure of the same protein · chain A against A, TM-score 0.70
- 3FZJ · Tsar low resolution crystal structure, tetragonal form · an experimental structure of the same protein · chain A against A, TM-score 0.70
- 3FXQ · Crystal structure of the LysR-type transcriptional regulator TsaR · an experimental structure of the same protein · chain A against A, TM-score 0.70
- 3FXQ · Crystal structure of the lysr-type transcriptional regulator tsar · an experimental structure of the same protein · chain A against A, TM-score 0.70
- 3FXR · Crystal structure of TsaR in complex with sulfate · an experimental structure of the same protein · chain A against A, TM-score 0.70
- 3FXR · Crystal structure of tsar in complex with sulfate · an experimental structure of the same protein · chain A against A, TM-score 0.70
- 3N6T · Effector binding domain of tsar · an experimental structure of the same protein · chain A against A, TM-score 0.67
- 3N6T · Effector binding domain of TsaR · an experimental structure of the same protein · chain A against A, TM-score 0.67
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P94678
- Elsewhere: UniProt P94678 · AlphaFold DB P94678
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