Research workbench
AlphaFold monomer V2.0 prediction for tRNA threonylcarbamoyladenosine biosynthesis protein tsab (Q7CQE0)
Analyse AlphaFold monomer V2.0 prediction for tRNA threonylcarbamoyladenosine… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q7CQE0
- Type
- protein
- Length
- 231 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x71112d4fF7ebb3b617963c05f052289e073082FD
- Molecule
- TRNA threonylcarbamoyladenosine biosynthesis protein tsab
- UniProt
- Q7CQE0
- Pockets
- 2 · best druggability 0.40
Structure
1 distinct chain · 35% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA threonylcarbamoyladenosine biosynthesis protein tsab | protein | 231 | 35% helix, 28% strand | Q7CQE0 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 90 | 0.40 | 0.78 | 18 | empty |
| 2 | 54 | 0.39 | 0.81 | 14 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 2GEL · 2.05A crystal structure of Salmonella typhimurium YeaZ, form B · an experimental structure of the same protein · chain A against A, TM-score 0.93
- 2GEL · 2.05A crystal structure of salmonella typhimurium yeaz, form B · an experimental structure of the same protein · chain A against A, TM-score 0.93
- 2GEM · 2.1A crystal structure of Salmonella tyhpimurium YeaZ, a putative Gram-negative RPF… · an experimental structure of the same protein · chain A against A, TM-score 0.92
- 2GEM · 2.1A crystal structure of salmonella tyhpimurium yeaz, a putative gram-negative rpf… · an experimental structure of the same protein · chain A against A, TM-score 0.92
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7CQE0
- Elsewhere: UniProt Q7CQE0 · AlphaFold DB Q7CQE0
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