Research workbench
AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase D (Q8P9Y9)
Analyse AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase D (Q8P9Y9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8P9Y9
- Type
- protein
- Length
- 367 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xdB93A270Df7544578D79B65b2753Ca9b57d1c697
- Molecule
- TRNA pseudouridine synthase D
- UniProt
- Q8P9Y9
- Pockets
- 2 · best druggability 0.73
Structure
1 distinct chain · 32% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA pseudouridine synthase D | protein | 367 | 32% helix, 29% strand | Q8P9Y9 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 762 | 0.73 | 0.79 | 68 | empty |
| 2 | 327 | 0.60 | 0.78 | 35 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8P9Y9
- Elsewhere: UniProt Q8P9Y9 · AlphaFold DB Q8P9Y9
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