Research workbench
AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase D (Q9KUJ0)
Analyse AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase D (Q9KUJ0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9KUJ0
- Type
- protein
- Length
- 361 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9e5E98E011361C5888c92e2CDb7652E02Bd5C7Ed
- Molecule
- TRNA pseudouridine synthase D
- UniProt
- Q9KUJ0
- Pockets
- 3 · best druggability 0.68
Structure
1 distinct chain · 32% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA pseudouridine synthase D | protein | 361 | 32% helix, 25% strand | Q9KUJ0 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 681 | 0.68 | 0.76 | 61 | empty |
| 2 | 218 | 0.49 | 0.75 | 30 | empty |
| 3 | 93 | 0.34 | 0.74 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9KUJ0
- Elsewhere: UniProt Q9KUJ0 · AlphaFold DB Q9KUJ0
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