Research workbench
AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase D (Q02R98)
Analyse AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase D (Q02R98) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q02R98
- Type
- protein
- Length
- 355 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xA87550770664D95cD335A75d93ad09c892e46C41
- Molecule
- TRNA pseudouridine synthase D
- UniProt
- Q02R98
- Pockets
- 2 · best druggability 0.69
Structure
1 distinct chain · 33% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA pseudouridine synthase D | protein | 355 | 33% helix, 27% strand | Q02R98 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 683 | 0.69 | 0.77 | 54 | empty |
| 2 | 305 | 0.53 | 0.75 | 27 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q02R98
- Elsewhere: UniProt Q02R98 · AlphaFold DB Q02R98
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