Research workbench
AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase D (Q5X4T2)
Analyse AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase D (Q5X4T2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5X4T2
- Type
- protein
- Length
- 338 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf4ED13986579E8e227b3ED6c02276c648754EC27
- Molecule
- TRNA pseudouridine synthase D
- UniProt
- Q5X4T2
- Pockets
- 3 · best druggability 0.70
Structure
1 distinct chain · 33% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA pseudouridine synthase D | protein | 338 | 33% helix, 27% strand | Q5X4T2 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 706 | 0.70 | 0.77 | 60 | empty |
| 2 | 62 | 0.39 | 0.79 | 15 | empty |
| 3 | 62 | 0.36 | 0.78 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5X4T2
- Elsewhere: UniProt Q5X4T2 · AlphaFold DB Q5X4T2
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