Research workbench
AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase D (B1LQ65)
Analyse AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase D (B1LQ65) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1LQ65
- Type
- protein
- Length
- 349 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7FDF8b382C6a36A8772D1A265E8e480c7DF0A9C1
- Molecule
- TRNA pseudouridine synthase D
- UniProt
- B1LQ65
- Pockets
- 2 · best druggability 0.73
Structure
1 distinct chain · 33% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA pseudouridine synthase D | protein | 349 | 33% helix, 26% strand | B1LQ65 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 726 | 0.73 | 0.79 | 65 | empty |
| 2 | 141 | 0.46 | 0.77 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1LQ65
- Elsewhere: UniProt B1LQ65 · AlphaFold DB B1LQ65
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