Research workbench
AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase D (A8A3M4)
Analyse AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase D (A8A3M4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A8A3M4
- Type
- protein
- Length
- 349 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5a2a011589101378f111159295C39a0560515Ab8
- Molecule
- TRNA pseudouridine synthase D
- UniProt
- A8A3M4
- Pockets
- 2 · best druggability 0.73
Structure
1 distinct chain · 34% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA pseudouridine synthase D | protein | 349 | 34% helix, 26% strand | A8A3M4 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 707 | 0.73 | 0.79 | 67 | empty |
| 2 | 118 | 0.46 | 0.78 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A8A3M4
- Elsewhere: UniProt A8A3M4 · AlphaFold DB A8A3M4
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.