Research workbench
AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase D (A1W165)
Analyse AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase D (A1W165) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A1W165
- Type
- protein
- Length
- 372 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5881B09f2D8e743400698633641fc1cD2Ed2BE6F
- Molecule
- TRNA pseudouridine synthase D
- UniProt
- A1W165
- Pockets
- 3 · best druggability 0.67
Structure
1 distinct chain · 37% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA pseudouridine synthase D | protein | 372 | 37% helix, 24% strand | A1W165 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 532 | 0.67 | 0.77 | 47 | empty |
| 2 | 346 | 0.64 | 0.79 | 38 | empty |
| 3 | 93 | 0.41 | 0.78 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A1W165
- Elsewhere: UniProt A1W165 · AlphaFold DB A1W165
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