Research workbench
AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase B (Q5GXV1)
Analyse AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase B (Q5GXV1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5GXV1
- Type
- protein
- Length
- 308 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x661f92Fc5950020C7aB410B5F5b9a3f429F49Ae5
- Molecule
- TRNA pseudouridine synthase B
- UniProt
- Q5GXV1
- Pockets
- 3 · best druggability 0.60
Structure
1 distinct chain · 24% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA pseudouridine synthase B | protein | 308 | 24% helix, 36% strand | Q5GXV1 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 268 | 0.60 | 0.79 | 34 | empty |
| 2 | 102 | 0.40 | 0.76 | 20 | empty |
| 3 | 64 | 0.27 | 0.73 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5GXV1
- Elsewhere: UniProt Q5GXV1 · AlphaFold DB Q5GXV1
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