Research workbench
AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase B (B3CM19)
Analyse AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase B (B3CM19) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B3CM19
- Type
- protein
- Length
- 353 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb3c0C983Fc44934AC589D7131C08a72544EBB92E
- Molecule
- TRNA pseudouridine synthase B
- UniProt
- B3CM19
- Pockets
- 5 · best druggability 0.56
Structure
1 distinct chain · 21% helix, 33% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA pseudouridine synthase B | protein | 353 | 21% helix, 33% strand | B3CM19 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 127 | 0.56 | 0.83 | 23 | empty |
| 2 | 106 | 0.39 | 0.76 | 18 | empty |
| 3 | 56 | 0.37 | 0.79 | 15 | empty |
| 4 | 88 | 0.33 | 0.73 | 15 | empty |
| 5 | 72 | 0.30 | 0.74 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B3CM19
- Elsewhere: UniProt B3CM19 · AlphaFold DB B3CM19
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