Research workbench
AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase B (Q2YXP5)
Analyse AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase B (Q2YXP5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q2YXP5
- Type
- protein
- Length
- 305 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x28e51F615E58598362D09182b4f56f5cAD52f49a
- Molecule
- TRNA pseudouridine synthase B
- UniProt
- Q2YXP5
- Pockets
- 3 · best druggability 0.63
Structure
1 distinct chain · 27% helix, 37% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA pseudouridine synthase B | protein | 305 | 27% helix, 37% strand | Q2YXP5 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 326 | 0.63 | 0.79 | 45 | empty |
| 2 | 51 | 0.26 | 0.73 | 15 | empty |
| 3 | 50 | 0.23 | 0.72 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2YXP5
- Elsewhere: UniProt Q2YXP5 · AlphaFold DB Q2YXP5
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