Research workbench
AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase B (C4K0F2)
Analyse AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase B (C4K0F2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C4K0F2
- Type
- protein
- Length
- 345 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6DAA77C4263E74E745cA9c4D8E291e57e8991Cf5
- Molecule
- TRNA pseudouridine synthase B
- UniProt
- C4K0F2
- Pockets
- 6 · best druggability 0.64
Structure
1 distinct chain · 24% helix, 37% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA pseudouridine synthase B | protein | 345 | 24% helix, 37% strand | C4K0F2 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 368 | 0.64 | 0.79 | 38 | empty |
| 2 | 126 | 0.43 | 0.76 | 19 | empty |
| 3 | 81 | 0.35 | 0.76 | 17 | empty |
| 4 | 89 | 0.34 | 0.73 | 15 | empty |
| 5 | 72 | 0.30 | 0.73 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C4K0F2
- Elsewhere: UniProt C4K0F2 · AlphaFold DB C4K0F2
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