Research workbench
AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase B (C3PNK4)
Analyse AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase B (C3PNK4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C3PNK4
- Type
- protein
- Length
- 345 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x564AA69Ea37cc6110e2E0826D8DB19f7e606b966
- Molecule
- TRNA pseudouridine synthase B
- UniProt
- C3PNK4
- Pockets
- 4 · best druggability 0.65
Structure
1 distinct chain · 30% helix, 33% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA pseudouridine synthase B | protein | 345 | 30% helix, 33% strand | C3PNK4 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 354 | 0.65 | 0.80 | 39 | empty |
| 2 | 223 | 0.56 | 0.78 | 23 | empty |
| 3 | 109 | 0.49 | 0.80 | 19 | empty |
| 4 | 72 | 0.28 | 0.73 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C3PNK4
- Elsewhere: UniProt C3PNK4 · AlphaFold DB C3PNK4
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