Research workbench
AlphaFold monomer V2.0 prediction for probable tRNA pseudouridine synthase B (Q8PV20)
Analyse AlphaFold monomer V2.0 prediction for probable tRNA pseudouridine synthase B… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8PV20
- Type
- protein
- Length
- 338 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb4D2d9c96b0D792d0b77e7147D724cc1F801ae58
- Molecule
- Probable tRNA pseudouridine synthase B
- UniProt
- Q8PV20
- Pockets
- 2 · best druggability 0.62
Structure
1 distinct chain · 30% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable tRNA pseudouridine synthase B | protein | 338 | 30% helix, 31% strand | Q8PV20 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 275 | 0.62 | 0.80 | 41 | empty |
| 2 | 56 | 0.31 | 0.76 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8PV20
- Elsewhere: UniProt Q8PV20 · AlphaFold DB Q8PV20
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