Research workbench
AlphaFold monomer V2.0 prediction for probable tRNA pseudouridine synthase B (A6VHV2)
Analyse AlphaFold monomer V2.0 prediction for probable tRNA pseudouridine synthase B… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A6VHV2
- Type
- protein
- Length
- 333 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1ED4a68B4011314730adE976b56Ad4cA21b54dcD
- Molecule
- Probable tRNA pseudouridine synthase B
- UniProt
- A6VHV2
- Pockets
- 3 · best druggability 0.59
Structure
1 distinct chain · 32% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable tRNA pseudouridine synthase B | protein | 333 | 32% helix, 31% strand | A6VHV2 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 231 | 0.59 | 0.80 | 35 | empty |
| 2 | 55 | 0.42 | 0.82 | 15 | empty |
| 3 | 62 | 0.34 | 0.77 | 11 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A6VHV2
- Elsewhere: UniProt A6VHV2 · AlphaFold DB A6VHV2
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