Research workbench
AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase B (Q0I3P3)
Analyse AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase B (Q0I3P3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q0I3P3
- Type
- protein
- Length
- 308 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7012c0b45c68a2c067644b9d3e5DDa06892c6957
- Molecule
- TRNA pseudouridine synthase B
- UniProt
- Q0I3P3
- Pockets
- 5 · best druggability 0.62
Structure
1 distinct chain · 26% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA pseudouridine synthase B | protein | 308 | 26% helix, 35% strand | Q0I3P3 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 342 | 0.62 | 0.78 | 41 | empty |
| 2 | 56 | 0.34 | 0.78 | 13 | empty |
| 3 | 63 | 0.29 | 0.73 | 14 | empty |
| 4 | 65 | 0.28 | 0.72 | 11 | empty |
| 5 | 52 | 0.25 | 0.73 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0I3P3
- Elsewhere: UniProt Q0I3P3 · AlphaFold DB Q0I3P3
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