Research workbench
AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase B (A5GF89)
Analyse AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase B (A5GF89) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A5GF89
- Type
- protein
- Length
- 310 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x2F9A0D66e2Ea61E601DdF4497CB8965a2265d798
- Molecule
- TRNA pseudouridine synthase B
- UniProt
- A5GF89
- Pockets
- 4 · best druggability 0.64
Structure
1 distinct chain · 27% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA pseudouridine synthase B | protein | 310 | 27% helix, 35% strand | A5GF89 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 337 | 0.64 | 0.79 | 36 | empty |
| 2 | 104 | 0.56 | 0.84 | 25 | empty |
| 3 | 53 | 0.41 | 0.82 | 17 | empty |
| 4 | 56 | 0.27 | 0.73 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5GF89
- Elsewhere: UniProt A5GF89 · AlphaFold DB A5GF89
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