Research workbench
AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase B (Q5NER4)
Analyse AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase B (Q5NER4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5NER4
- Type
- protein
- Length
- 302 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x45d8D4ee8f2360A9C240C13D999Cf56Beaf8eE7C
- Molecule
- TRNA pseudouridine synthase B
- UniProt
- Q5NER4
- Pockets
- 2 · best druggability 0.62
Structure
1 distinct chain · 26% helix, 38% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA pseudouridine synthase B | protein | 302 | 26% helix, 38% strand | Q5NER4 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 316 | 0.62 | 0.79 | 38 | empty |
| 2 | 75 | 0.31 | 0.74 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5NER4
- Elsewhere: UniProt Q5NER4 · AlphaFold DB Q5NER4
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