Research workbench
AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase a (Q668W9)
Analyse AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase a (Q668W9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q668W9
- Type
- protein
- Length
- 264 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB35df660264f41795De49C83276C108A4ba91ADE
- Molecule
- TRNA pseudouridine synthase a
- UniProt
- Q668W9
- Pockets
- 5 · best druggability 0.62
Structure
1 distinct chain · 26% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA pseudouridine synthase a | protein | 264 | 26% helix, 28% strand | Q668W9 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 334 | 0.62 | 0.79 | 36 | empty |
| 2 | 135 | 0.52 | 0.81 | 26 | empty |
| 3 | 71 | 0.41 | 0.79 | 12 | empty |
| 4 | 62 | 0.30 | 0.75 | 16 | empty |
| 5 | 55 | 0.26 | 0.73 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q668W9
- Elsewhere: UniProt Q668W9 · AlphaFold DB Q668W9
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