Research workbench
AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase a (Q82DM1)
Analyse AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase a (Q82DM1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q82DM1
- Type
- protein
- Length
- 285 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xAE6e7eC4cC5F9618Bc5ee759C76FD0817630792f
- Molecule
- TRNA pseudouridine synthase a
- UniProt
- Q82DM1
- Pockets
- 3 · best druggability 0.71
Structure
1 distinct chain · 25% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA pseudouridine synthase a | protein | 285 | 25% helix, 25% strand | Q82DM1 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 391 | 0.71 | 0.82 | 43 | empty |
| 2 | 184 | 0.46 | 0.75 | 24 | empty |
| 3 | 59 | 0.27 | 0.73 | 14 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q82DM1
- Elsewhere: UniProt Q82DM1 · AlphaFold DB Q82DM1
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