Research workbench
AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase a (B8CPW5)
Analyse AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase a (B8CPW5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B8CPW5
- Type
- protein
- Length
- 261 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6d258c29D80b821963E51A344827d133821D228B
- Molecule
- TRNA pseudouridine synthase a
- UniProt
- B8CPW5
- Pockets
- 4 · best druggability 0.64
Structure
1 distinct chain · 26% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA pseudouridine synthase a | protein | 261 | 26% helix, 28% strand | B8CPW5 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 336 | 0.64 | 0.79 | 35 | empty |
| 2 | 101 | 0.56 | 0.85 | 23 | empty |
| 3 | 58 | 0.36 | 0.78 | 10 | empty |
| 4 | 61 | 0.31 | 0.76 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B8CPW5
- Elsewhere: UniProt B8CPW5 · AlphaFold DB B8CPW5
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