Research workbench
AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase a (Q6D2N7)
Analyse AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase a (Q6D2N7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6D2N7
- Type
- protein
- Length
- 283 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x8ac4aCdE11abD55b4e65080Db513202c8AE54934
- Molecule
- TRNA pseudouridine synthase a
- UniProt
- Q6D2N7
- Pockets
- 4 · best druggability 0.63
Structure
1 distinct chain · 28% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA pseudouridine synthase a | protein | 283 | 28% helix, 26% strand | Q6D2N7 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 340 | 0.63 | 0.79 | 37 | empty |
| 2 | 90 | 0.54 | 0.85 | 26 | empty |
| 3 | 64 | 0.41 | 0.80 | 13 | empty |
| 4 | 54 | 0.29 | 0.75 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6D2N7
- Elsewhere: UniProt Q6D2N7 · AlphaFold DB Q6D2N7
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