Research workbench
AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase a (Q820P8)
Analyse AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase a (Q820P8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q820P8
- Type
- protein
- Length
- 272 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x2E70618e0388072122786Fd80c7EC6179fE5f698
- Molecule
- TRNA pseudouridine synthase a
- UniProt
- Q820P8
- Pockets
- 3 · best druggability 0.66
Structure
1 distinct chain · 27% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA pseudouridine synthase a | protein | 272 | 27% helix, 29% strand | Q820P8 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 272 | 0.66 | 0.82 | 36 | empty |
| 2 | 120 | 0.39 | 0.74 | 20 | empty |
| 3 | 92 | 0.33 | 0.73 | 21 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q820P8
- Elsewhere: UniProt Q820P8 · AlphaFold DB Q820P8
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