Research workbench
AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase a (Q6MSQ4)
Analyse AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase a (Q6MSQ4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6MSQ4
- Type
- protein
- Length
- 251 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x2e8Fbb947b0Bc2a2DB44100d3D43354e3aA89cEA
- Molecule
- TRNA pseudouridine synthase a
- UniProt
- Q6MSQ4
- Pockets
- 3 · best druggability 0.56
Structure
1 distinct chain · 29% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA pseudouridine synthase a | protein | 251 | 29% helix, 32% strand | Q6MSQ4 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 268 | 0.56 | 0.77 | 35 | empty |
| 2 | 50 | 0.28 | 0.75 | 13 | empty |
| 3 | 61 | 0.28 | 0.73 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6MSQ4
- Elsewhere: UniProt Q6MSQ4 · AlphaFold DB Q6MSQ4
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