Research workbench
AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase a (Q5L6V3)
Analyse AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase a (Q5L6V3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5L6V3
- Type
- protein
- Length
- 268 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x206E461b06c416cC6058027b28EcB722207C63a9
- Molecule
- TRNA pseudouridine synthase a
- UniProt
- Q5L6V3
- Pockets
- 2 · best druggability 0.62
Structure
1 distinct chain · 28% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA pseudouridine synthase a | protein | 268 | 28% helix, 26% strand | Q5L6V3 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 284 | 0.62 | 0.80 | 35 | empty |
| 2 | 61 | 0.30 | 0.74 | 13 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5L6V3
- Elsewhere: UniProt Q5L6V3 · AlphaFold DB Q5L6V3
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