Research workbench
AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase a (A4JMC2)
Analyse AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase a (A4JMC2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4JMC2
- Type
- protein
- Length
- 270 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x02928767Cd38aeb0E96b8eac0D163d47785dC64E
- Molecule
- TRNA pseudouridine synthase a
- UniProt
- A4JMC2
- Pockets
- 3 · best druggability 0.65
Structure
1 distinct chain · 27% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA pseudouridine synthase a | protein | 270 | 27% helix, 27% strand | A4JMC2 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 281 | 0.65 | 0.82 | 41 | empty |
| 2 | 94 | 0.48 | 0.82 | 27 | empty |
| 3 | 79 | 0.34 | 0.75 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4JMC2
- Elsewhere: UniProt A4JMC2 · AlphaFold DB A4JMC2
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