Research workbench
AlphaFold monomer V2.0 prediction for tRNA ligase 1 (Q10313)
Analyse AlphaFold monomer V2.0 prediction for tRNA ligase 1 (Q10313) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q10313
- Type
- protein
- Length
- 787 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x97AD768995300e55b4CD8aaef33b93A4B7B3153A
- Molecule
- TRNA ligase 1
- UniProt
- Q10313
- Pockets
- 10 · best druggability 0.67
Structure
1 distinct chain · 35% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA ligase 1 | protein | 787 | 35% helix, 25% strand | Q10313 |
Pockets
10 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 334 | 0.67 | 0.82 | 43 | empty |
| 2 | 442 | 0.66 | 0.79 | 51 | empty |
| 3 | 195 | 0.65 | 0.84 | 31 | empty |
| 4 | 282 | 0.55 | 0.76 | 32 | empty |
| 5 | 158 | 0.46 | 0.76 | 28 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q10313
- Elsewhere: UniProt Q10313 · AlphaFold DB Q10313
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