Research workbench
AlphaFold monomer V2.0 prediction for tRNA (CYTIDINE/URIDINE-2'-O-)-methyltransferase trmj (Q5PNG3)
Analyse AlphaFold monomer V2.0 prediction for tRNA… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5PNG3
- Type
- protein
- Length
- 243 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0c3BD61770FeF3aB621008259DC933f6DfDc3882
- Molecule
- TRNA (CYTIDINE/URIDINE-2'-O-)-methyltransferase trmj
- UniProt
- Q5PNG3
- Pockets
- 3 · best druggability 0.60
Structure
1 distinct chain · 50% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA (CYTIDINE/URIDINE-2'-O-)-methyltransferase trmj | protein | 243 | 50% helix, 14% strand | Q5PNG3 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 217 | 0.60 | 0.81 | 25 | empty |
| 2 | 58 | 0.47 | 0.84 | 13 | empty |
| 3 | 108 | 0.41 | 0.77 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5PNG3
- Elsewhere: UniProt Q5PNG3 · AlphaFold DB Q5PNG3
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