Research workbench
AlphaFold monomer V2.0 prediction for tRNA (guanine-N(1)-)-methyltransferase (B5YFD5)
Analyse AlphaFold monomer V2.0 prediction for tRNA (guanine-N(1)-)-methyltransferase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B5YFD5
- Type
- protein
- Length
- 245 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbff27Dc0a932A6E0d9Fe883AAbD1BF27bB95A69F
- Molecule
- TRNA (guanine-N(1)-)-methyltransferase
- UniProt
- B5YFD5
- Pockets
- 3 · best druggability 0.54
Structure
1 distinct chain · 40% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA (guanine-N(1)-)-methyltransferase | protein | 245 | 40% helix, 19% strand | B5YFD5 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 121 | 0.54 | 0.82 | 25 | empty |
| 2 | 81 | 0.45 | 0.81 | 18 | empty |
| 3 | 55 | 0.25 | 0.72 | 9 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5YFD5
- Elsewhere: UniProt B5YFD5 · AlphaFold DB B5YFD5
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