Research workbench
AlphaFold monomer V2.0 prediction for tRNA (URACIL(54)-C(5))-methyltransferase homolog (Q8BQJ6)
Analyse AlphaFold monomer V2.0 prediction for tRNA (URACIL(54)-C(5))-methyltransferase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8BQJ6
- Type
- protein
- Length
- 493 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x03eE9dF280950A2b9f9DE96506c6093Adc158ac7
- Molecule
- TRNA (URACIL(54)-C(5))-methyltransferase homolog
- UniProt
- Q8BQJ6
- Pockets
- 4 · best druggability 0.66
Structure
1 distinct chain · 29% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA (URACIL(54)-C(5))-methyltransferase homolog | protein | 493 | 29% helix, 21% strand | Q8BQJ6 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 639 | 0.66 | 0.75 | 59 | empty |
| 2 | 102 | 0.46 | 0.80 | 15 | empty |
| 3 | 80 | 0.37 | 0.76 | 15 | empty |
| 4 | 62 | 0.34 | 0.77 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8BQJ6
- Elsewhere: UniProt Q8BQJ6 · AlphaFold DB Q8BQJ6
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