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AlphaFold monomer V2.0 prediction for TRNA:M(4)X modification enzyme TRM13 (Q12383)
Analyse AlphaFold monomer V2.0 prediction for TRNA:M(4)X modification enzyme TRM13… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q12383
- Type
- protein
- Length
- 476 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x97EfFf2d74994e28D3b69b1503Bd9c292B2Df480
- Molecule
- TRNA:M(4)X modification enzyme TRM13
- UniProt
- Q12383
- Pockets
- 4 · best druggability 0.50
Structure
1 distinct chain · 38% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA:M(4)X modification enzyme TRM13 | protein | 476 | 38% helix, 17% strand | Q12383 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 161 | 0.50 | 0.78 | 25 | empty |
| 2 | 144 | 0.45 | 0.76 | 29 | empty |
| 3 | 192 | 0.45 | 0.74 | 27 | empty |
| 4 | 59 | 0.29 | 0.74 | 11 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q12383
- Elsewhere: UniProt Q12383 · AlphaFold DB Q12383
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