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AlphaFold monomer V2.0 prediction for TRNA:M(4)X modification enzyme TRM13 (Q6C4F8)
Analyse AlphaFold monomer V2.0 prediction for TRNA:M(4)X modification enzyme TRM13… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6C4F8
- Type
- protein
- Length
- 464 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf4ED13986579E8e227b3ED6c02276c648754EC27
- Molecule
- TRNA:M(4)X modification enzyme TRM13
- UniProt
- Q6C4F8
- Pockets
- 5 · best druggability 0.49
Structure
1 distinct chain · 36% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA:M(4)X modification enzyme TRM13 | protein | 464 | 36% helix, 16% strand | Q6C4F8 |
Pockets
5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 187 | 0.49 | 0.76 | 29 | empty |
| 2 | 123 | 0.41 | 0.75 | 18 | empty |
| 3 | 76 | 0.41 | 0.79 | 18 | empty |
| 4 | 85 | 0.34 | 0.75 | 15 | empty |
| 5 | 52 | 0.33 | 0.78 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6C4F8
- Elsewhere: UniProt Q6C4F8 · AlphaFold DB Q6C4F8
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