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AlphaFold monomer V2.0 prediction for tRNA (GUANINE(9)-N1)-methyltransferase (Q12400)

Analyse AlphaFold monomer V2.0 prediction for tRNA (GUANINE(9)-N1)-methyltransferase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q12400
Type: protein
Length: 293 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x71112d4fF7ebb3b617963c05f052289e073082FD
Molecule: TRNA (GUANINE(9)-N1)-methyltransferase
UniProt: Q12400
Pockets: 2 · best druggability 0.72

Structure

1 distinct chain · 42% helix, 12% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	TRNA (GUANINE(9)-N1)-methyltransferase	protein	293	42% helix, 12% strand	Q12400

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	228	0.72	0.88	31	empty
2	52	0.34	0.78	11	empty

Compared structures

4JWJ · Crystal structure of scTrm10(84)-SAH complex · an experimental structure of the same protein · chain A against A, TM-score 0.64
4JWJ · Crystal structure of SCTRM10(84)-sah complex · an experimental structure of the same protein · chain A against A, TM-score 0.64

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q12400
Elsewhere: UniProt Q12400 · AlphaFold DB Q12400

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