Research workbench
AlphaFold monomer V2.0 prediction for trk system potassium uptake protein trka (Q04856)
Analyse AlphaFold monomer V2.0 prediction for trk system potassium uptake protein trka… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q04856
- Type
- protein
- Length
- 458 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x360F3648Ae1D86cC132fB5b953aD9558Bef99Aa0
- Molecule
- Trk system potassium uptake protein trka
- UniProt
- Q04856
- Pockets
- 6 · best druggability 0.65
Structure
1 distinct chain · 39% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Trk system potassium uptake protein trka | protein | 458 | 39% helix, 27% strand | Q04856 |
Pockets
6 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 174 | 0.65 | 0.85 | 26 | empty |
| 2 | 292 | 0.59 | 0.78 | 47 | empty |
| 3 | 209 | 0.55 | 0.78 | 30 | empty |
| 4 | 136 | 0.54 | 0.82 | 20 | empty |
| 5 | 91 | 0.40 | 0.77 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q04856
- Elsewhere: UniProt Q04856 · AlphaFold DB Q04856
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