Research workbench
AlphaFold monomer V2.0 prediction for E3 ubiquitin-protein ligase TRIM4 (Q9C037)
Analyse AlphaFold monomer V2.0 prediction for E3 ubiquitin-protein ligase TRIM4 (Q9C037) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9C037
- Type
- protein
- Length
- 500 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6717A0851620Ad326247dFf63f66511ff04d42ec
- Molecule
- E3 ubiquitin-protein ligase TRIM4
- UniProt
- Q9C037
- Pockets
- 3 · best druggability 0.68
Structure
1 distinct chain · 42% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | E3 ubiquitin-protein ligase TRIM4 | protein | 500 | 42% helix, 20% strand | Q9C037 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 155 | 0.68 | 0.88 | 27 | empty |
| 2 | 77 | 0.31 | 0.73 | 17 | empty |
| 3 | 57 | 0.27 | 0.73 | 10 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9C037
- Elsewhere: UniProt Q9C037 · AlphaFold DB Q9C037
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