Research workbench
AlphaFold monomer V2.0 prediction for trichodiene synthase (Q6A1B7)
Analyse AlphaFold monomer V2.0 prediction for trichodiene synthase (Q6A1B7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6A1B7
- Type
- protein
- Length
- 388 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9188600a0FCa2914254C94299b1bd9721Bc4D500
- Molecule
- Trichodiene synthase
- UniProt
- Q6A1B7
- Pockets
- 4 · best druggability 0.79
Structure
1 distinct chain · 70% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Trichodiene synthase | protein | 388 | 70% helix, 0% strand | Q6A1B7 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 416 | 0.79 | 0.88 | 47 | empty |
| 2 | 68 | 0.49 | 0.85 | 16 | empty |
| 3 | 75 | 0.41 | 0.79 | 17 | empty |
| 4 | 63 | 0.41 | 0.81 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6A1B7
- Elsewhere: UniProt Q6A1B7 · AlphaFold DB Q6A1B7
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