Research workbench
AlphaFold monomer V2.0 prediction for tripartite motif-containing protein 45 (Q6PFY8)
Analyse AlphaFold monomer V2.0 prediction for tripartite motif-containing protein 45… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6PFY8
- Type
- protein
- Length
- 580 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xAaA863E14cD17cb4c26e239Ad348e822228468a2
- Molecule
- Tripartite motif-containing protein 45
- UniProt
- Q6PFY8
- Pockets
- 2 · best druggability 0.63
Structure
1 distinct chain · 30% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Tripartite motif-containing protein 45 | protein | 580 | 30% helix, 20% strand | Q6PFY8 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 235 | 0.63 | 0.82 | 39 | empty |
| 2 | 100 | 0.36 | 0.74 | 19 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 8SDI · Hydrophobic Interactions Drive the Tetrameric Assembly of the TRIM45 Coiled-Coil Domain · an experimental structure of the same protein · chain A against A, TM-score 0.14
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6PFY8
- Elsewhere: UniProt Q6PFY8 · AlphaFold DB Q6PFY8
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