Research workbench

AlphaFold monomer V2.0 prediction for E3 ubiquitin ligase TRIM40 (Q6MFY8)

Analyse AlphaFold monomer V2.0 prediction for E3 ubiquitin ligase TRIM40 (Q6MFY8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q6MFY8
Type: protein
Length: 247 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x5c4adF1416281C09AE8eE1cbb80fF7e44cE86F97
Molecule: E3 ubiquitin ligase TRIM40
UniProt: Q6MFY8
Pockets: 2 · best druggability 0.46

Structure

1 distinct chain · 55% helix, 10% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	E3 ubiquitin ligase TRIM40	protein	247	55% helix, 10% strand	Q6MFY8

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	158	0.46	0.76	19	empty
2	51	0.26	0.73	15	empty

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q6MFY8
Elsewhere: UniProt Q6MFY8 · AlphaFold DB Q6MFY8

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