Research workbench
AlphaFold monomer V2.0 prediction for trichothecene efflux pump TRI12 (G0KYA8)
Analyse AlphaFold monomer V2.0 prediction for trichothecene efflux pump TRI12 (G0KYA8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- G0KYA8
- Type
- protein
- Length
- 602 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5881B09f2D8e743400698633641fc1cD2Ed2BE6F
- Molecule
- Trichothecene efflux pump TRI12
- UniProt
- G0KYA8
- Pockets
- 7 · best druggability 0.84
Structure
1 distinct chain · 74% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Trichothecene efflux pump TRI12 | protein | 602 | 74% helix, 1% strand | G0KYA8 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1106 | 0.84 | 0.85 | 104 | empty |
| 2 | 213 | 0.65 | 0.84 | 39 | empty |
| 3 | 240 | 0.55 | 0.76 | 25 | empty |
| 4 | 95 | 0.47 | 0.80 | 24 | empty |
| 5 | 149 | 0.43 | 0.75 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G0KYA8
- Elsewhere: UniProt G0KYA8 · AlphaFold DB G0KYA8
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